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Insilico Predictive Model for Anti-Microbial Properties of Ni (II)-Schiff Bases’ Complexes Against Staphylococcus aureus and Candida albicans

Received: 10 September 2017    Accepted: 20 September 2017    Published: 17 October 2017
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Abstract

The emergence of multi-drug resistant strain of Staphylococcus aureus and Candida albicans has necessitated the exploration and development of newer structural moiety of Nickel-Schiff bases’ complexes as potential drug candidates against the aforementioned pathogens owing to their enormous inhibitory activity against these microbes. In this study, a Quantitative Structure Activity Relationship analysis was performed on some selected complexes by correlating their experimentally validated bioactivities against the pathogenic microbes with the OD, 1D, 2D and 3D descriptors of the molecules through linear regression resulting in the generation of three statistically significant models from which a hexa-parametric model was selected as the most robust model with R2 = 0.909, R2 adj = 0.890, Q2 = 0.844, R2ext = 0.609. The optimization model hinted the predominance of the size descriptors (WD. volume and nT6Ring), descriptors of hydrogen bond acceptor ability of the complexes (nHBAcc2 and nHBAcc3) and a descriptor of molecular polarity (Weta 3. polar) in influencing the observed anti-microbial activites of the complexes. The wealth of information in this study could provide a blueprint in the design of novel bioactive complexes that could curb the alarming trend of multi-drug resistant strain of Staphylococcus aureus and Candida albicans.

Published in International Journal of Biochemistry, Biophysics & Molecular Biology (Volume 2, Issue 5)
DOI 10.11648/j.ijbbmb.20170205.11
Page(s) 36-46
Creative Commons

This is an Open Access article, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited.

Copyright

Copyright © The Author(s), 2024. Published by Science Publishing Group

Keywords

Staphylococcus aureus, Candida albicans, Descriptors, QSAR, Drug

References
[1] Perez, K. K.; Olsen, R. J.; Musick, W. L.; Cernoch, P. L.; Davis J. R.; Peterson, L. E.; Musser J. M. Integrating rapid diagnostics and antimicrobial stewardship improves outcomes in patients with antibiotic resistant Gramnegative bacteremia. J. Infect., 2014; 69: 216-225.
[2] Narasimhan, B.; Judge, V.; Narang, R.; Ohlan, S.; Ohlan, R. Quantitative structure activity relationship studies for prediction of antimicrobial activity of synthesized 2,4-hexadienoic acid derivatives. Bioorg Med Chem Lett, 2007; 21: 5836-5845.
[3] El-Mahmood, A. M.; De, N.; Alo, A. B. Susceptibility of nosocomial Staphylococcus aureus, Escherichia coli and Candida albicans to some antimicrobial drugs routinely used in Adamawa State Hospitals, Nigeria. Journal of Clinical Medicine and Research, 2010; 2(8): 125-134.
[4] Amita, S.; Chowdhury, R.; Thungapathia, M.; Ramamuthy, T.; Nair, G. B.; Ghosh, A. Class1 Integrons and SXT Elements in EL Tor Strains isolated before and after 1992 Vibrio cholerae 0139 outbreak, Calcutta, India. Emerg. Infect. Dis. 2003; 9(4): 500-502.
[5] Beaudin, B. A.; Brosnikoff, C. A.; Grimsrud, K. M.; Heffner, T. M.; Renmie, R. P.; Talbot, J. A. Susceptibility of human isolates of Salmonella typhimurium DT104 to antimicrobial agents used in human and veterinary medicine. Diagn. Microbiol. Infect. Dis., 2004; 42: 7-20.
[6] Keypour, H.; Rezaeivala, M.; Valencia, L.; Perez- Lourido, P.; Raza Khavasi, H. Polyhedron. 2009; 28: 3755
[7] Aurora, R.; Mariana, Carmen Chifiriuc; Emilia, Amzoiu; Cezar, Ionuu Spînu. Transition Metal (II) Complexes with Cefotaxime-Derived Schiff Base: Synthesis, Characterization, and Antimicrobial Studies. Hindawi Publishing Corporation Bioinorganic Chemistry and Applications. 2014; Article ID 926287, 17 pages.
[8] Hitendra, Kumar Lautre; Snigdha, Das; Kishor, Patil; Hafid, Youssouffi; Taibi, Ben Hadda; Ajai, Kumar Pillai. Evaluation of antimicrobial and diuretic activity of Schiff base metal complexes, part-i. World journal of pharmacy and pharmaceutical sciences. 2014; 3(6): 1267-1281.
[9] Joshi, K. R.; Rojivadiya, A. J.; Pandya, J. H. Synthesis, spectroscopic and antimicrobial studies of Schiff base metal complexes derived from 2-hydroxy-3-methoxy-5- nitrobenzaldehyde. International Journal of Inorganic Chemistry. 2014: Article ID 817412, 8 pages.
[10] Abhay, Nanda Srivastva; Netra, Pal Singh; Chandra, Kiran Shriwastaw. In vitro antibacterial and antifungal activities of binuclear transition metal complexes of ONNO Schiff base and 5-methyl-2,6-pyrimidine-dione and their spectroscopic validation, 2014; 30;30.
[11] Bhawani, Shankar; Rashmi, Tomar; Rakesh, Kumar; Madhu, Godhara; Vijay, Kumar Sharma. Antimicrobial activity of newly synthesized hydroxamic acid of pyrimidine-5-carboxylic acid and its complexes with Cu (II), Ni(II), Co(II) and Zn(II) metal ions. Journal of Chemical and Pharmaceutical Research, 2014; 6(5): 925-930.
[12] Halli, M. B.; Mallikarjun, K.; Suryakanth, S. S.; Vithal, Reddy P. Synthesis, characterization and biological studies of some metal complexes derived from benzofuran Schiff’s base. World journal of pharmacy and pharmaceutical sciences. 2014; 3(7), 1499-1512.
[13] Rayees, Ahmad Shiekh; Ismail, Ab Rahma; Maqsood, Ahmad Malik; Norhayati, Luddi; Sam’an, Malik Masud; Shaeel, Ahmed Al-Thabaiti. Transition Metal Complexes with Mixed Nitrogen-Sulphur (N-S) Donor Macrocyclic Schiff Base Ligand: Synthesis, Spectral, Electrochemical and Antimicrobial Studies. Int. J. Electrochem. Sci., 2013; 8: 6972 – 6987
[14] Mesut, Gomleksiz; Cihan, Alkan; Belgin, Erdem. Synthesis, characterization and antibacterial activity of 2-p-tolyl-1h-imidazo [4, 5 f] [1, 10] phenanthroline and its co(ii), ni(ii) and cu(ii) complexes. Bull. Chem. Soc. Ethiop. 2013; 27(2): 213-220.
[15] Singh, P. P.; Srivastava, H. K.; Pasha, F. A (2004). DFT-based QSAR study of testosterone and its derivatives, Bioorg Med Chem. 12(1): 171-7
[16] Dipti, Lakhe; Kiran, V. Mangaonkar. Synthesis, Characterization and Antimicrobial activity of Mixed Ligand Complexes of Ni (II), Cu(II) and Fe(III) ions with [phenol-2-[(3-methylphenyl)imino]methyl-4-nitro-] and [phenol-2-[(3-chlorophenyl)imino]methyl-4-nitro-]. International Journal of ChemTech Research. 2013; 5 (1): 293-298.
[17] Madhavan, Sivasankaran Nair; Dasan, Arish; Raphael, Selwin Joseyphus. Synthesis, characterization, antifungal, antibacterial and DNA cleavage studies of some heterocyclic Schiff base metal complexes. Journal of Saudi Chemical Society. 2012; 16: 83–88.
[18] Richa, Gupta; Nisha, Agrawal; Gupta, K. C. Synthesis, IR Spectral Studies and Biological Activities of some Rare Earth Metal Complexes with Biochemically relevant Ligand. Research Journal of Pharmaceutical, Biological and Chemical Sciences, 2012; 3(5): 50.
[19] Jhanwar, Bharat; Vandana, Sharma; Rajeev, K. Singla; Birendra, Shrivastava. QSAR - Hansch Analysis and Related Approaches in Drug Design. Pharmacologyonline 1. 2011; 306-344.
[20] Prado-Prado, F. J.; de la Vega, O. M.; Uriarte, E.; Ubeira, F. M.; Chou, K. C.; Gonzalez-Diaz H. Bioorg. Med. Chem. 2009; 17: 569.
[21] Preeti, Arora; Rakesh, Narang; Sonam, Bhatia; Surendra, Kumar Nayak; Sachin, Kumar Singh; Balasubramanian, Narasimhan. Synthesis, molecular docking and QSAR studies of 2, 4-disubstituted thiazoles as antimicrobial agents. Journal of Applied Pharmaceutical Science, 2015; 5 (02): 028-042.
[22] Pradeep, Kumar; Balasubramanian, Narasimhan; Kalavathy, Ramasamy; Vasudevan, Mani; Rakesh, Kumar Mishra; Abu Bakar, Abdul Majeed. Synthesis, antimicrobial, anticancer evaluation and QSAR studies of 2/3-bromo-N0-(substituted benzylidene/3 phenylallylidene) benzohydrazides. Arabian Journal of Chemistry. 2014; 30: 30.
[23] Sumit, Tahlan; Pradeep, Kumar; Kalavathy, Ramasamy; Vasudevan, Mani; Rakesh, Kumar Mishra; Abu Bakar, Abdul Majeed; Balasubramanian, Narasimhan. Synthesis, antimicrobial, anticancer evaluation and QSAR studies of N′-substituted benzylidene/2-hydroxynaphthalen-1-ylmethylene/3-phenylallylidene/5-oxopentylidene-4-(2-oxo-2-(4H-1,2,4-triazol-4-yl) methylamino) benzohydrazides. Arabian journal of chemistry, 2013; 10: 10-16.
[24] Milan, Mladenović; Nenad, Vuković; Slobodan, Sukdolak; Slavica, Solujić. Design of Novel 4-Hydroxy-chromene-2-one Derivatives as Antimicrobial Agents. Molecules, 2010; 15: 4294-4308.
[25] Vikramjeet, Judge; Balasubramanian, Narasimhan; Munish, Ahuja; Dharmarajan, Sriram; Perumal, Yogeeswari; Erik, De Clercq; Christophe, Pannecouque; Jan, Balzarini. Isonicotinic acid hydrazide derivatives: synthesis, antimicrobial activity, and QSAR studies. Med Chem Res. 2012; 21: 1451–1470
[26] Chaudhary, A.; Swaroop, R.; Singh, R. Buletin dela Sociead Chilena de Quimica, 2002; 47; 203.
[27] Trohalaki, S.; Giffort, E.; Pachter, R. Improved QSARs for predictive toxicology of halogenated hydrocarbons. Computers and Chemistry, 2000; 24: 421.
[28] Zhang, L.; Wan, J.; Yang, G (2004). A DFT-based QSARs study of protoporphyrinogen oxidase inhibitors: phenyl triazolinones. Bioorg Med Chem. 12(23): 6183-91.
[29] Hansch, C.; Fujita, T. P. Analysis: A Method for the correlation of biological activity and chemical structure. J Am Chem Soc. 1964; 86: 1616-1626.
[30] Ameji J. P., A. Uzairu and S. O. Idris (2015). Quantitative structure activity relationship study of nickel schiff base complexes as potent anti-candida albicans agents. Journal of Computational Methods in Molecular Design, 5 (3): 120-134.
[31] Ravichandran, Veerasamy; Harish, Rajak; Abhishek, Jain; Shalini, Sivadasan; Christapher, P. Varghese; Ram, Kishore Agrawal (2011). Validation of QSAR Models - Strategies and Importance: International Journal of Drug Design and Discovery, 2011; 2: 511-519.
[32] Shapiro, S.; Guggenheim, B. Inhibition of oral bacteria by phenolic compounds. Part 1. QSAR analysis using molecular connectivity. Quant. Struct. -Act. Relat., 1998; 17: 327–337.
[33] Heravi, M. J.; Kyani, A. Use of computer-assisted methods for the modeling of the retention time of a variety of volatile organic compounds: a PCA-MLR-ANN approach J. Chem. Inf. Comput. Sci., 2004; 44: 1328–1335.
[34] Raj Kaushal, Sheetal Thakur (2013). Syntheses and Biological screening of Schiff base complexes of Titanium (IV), Chemical Engineering Transactions, 32: 1801-1806.
Cite This Article
  • APA Style

    Ameji John Philip, Haruna Idris Muhammad, Raji Saheed Akinleye, Awor George Okorn, Ibraheem Wasiu Aderemi. (2017). Insilico Predictive Model for Anti-Microbial Properties of Ni (II)-Schiff Bases’ Complexes Against Staphylococcus aureus and Candida albicans. International Journal of Biochemistry, Biophysics & Molecular Biology, 2(5), 36-46. https://doi.org/10.11648/j.ijbbmb.20170205.11

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    ACS Style

    Ameji John Philip; Haruna Idris Muhammad; Raji Saheed Akinleye; Awor George Okorn; Ibraheem Wasiu Aderemi. Insilico Predictive Model for Anti-Microbial Properties of Ni (II)-Schiff Bases’ Complexes Against Staphylococcus aureus and Candida albicans. Int. J. Biochem. Biophys. Mol. Biol. 2017, 2(5), 36-46. doi: 10.11648/j.ijbbmb.20170205.11

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    AMA Style

    Ameji John Philip, Haruna Idris Muhammad, Raji Saheed Akinleye, Awor George Okorn, Ibraheem Wasiu Aderemi. Insilico Predictive Model for Anti-Microbial Properties of Ni (II)-Schiff Bases’ Complexes Against Staphylococcus aureus and Candida albicans. Int J Biochem Biophys Mol Biol. 2017;2(5):36-46. doi: 10.11648/j.ijbbmb.20170205.11

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  • @article{10.11648/j.ijbbmb.20170205.11,
      author = {Ameji John Philip and Haruna Idris Muhammad and Raji Saheed Akinleye and Awor George Okorn and Ibraheem Wasiu Aderemi},
      title = {Insilico Predictive Model for Anti-Microbial Properties of Ni (II)-Schiff Bases’ Complexes Against Staphylococcus aureus and Candida albicans},
      journal = {International Journal of Biochemistry, Biophysics & Molecular Biology},
      volume = {2},
      number = {5},
      pages = {36-46},
      doi = {10.11648/j.ijbbmb.20170205.11},
      url = {https://doi.org/10.11648/j.ijbbmb.20170205.11},
      eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.ijbbmb.20170205.11},
      abstract = {The emergence of multi-drug resistant strain of Staphylococcus aureus and Candida albicans has necessitated the exploration and development of newer structural moiety of Nickel-Schiff bases’ complexes as potential drug candidates against the aforementioned pathogens owing to their enormous inhibitory activity against these microbes. In this study, a Quantitative Structure Activity Relationship analysis was performed on some selected complexes by correlating their experimentally validated bioactivities against the pathogenic microbes with the OD, 1D, 2D and 3D descriptors of the molecules through linear regression resulting in the generation of three statistically significant models from which a hexa-parametric model was selected as the most robust model with R2 = 0.909, R2 adj = 0.890, Q2 = 0.844, R2ext = 0.609. The optimization model hinted the predominance of the size descriptors (WD. volume and nT6Ring), descriptors of hydrogen bond acceptor ability of the complexes (nHBAcc2 and nHBAcc3) and a descriptor of molecular polarity (Weta 3. polar) in influencing the observed anti-microbial activites of the complexes. The wealth of information in this study could provide a blueprint in the design of novel bioactive complexes that could curb the alarming trend of multi-drug resistant strain of Staphylococcus aureus and Candida albicans.},
     year = {2017}
    }
    

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  • TY  - JOUR
    T1  - Insilico Predictive Model for Anti-Microbial Properties of Ni (II)-Schiff Bases’ Complexes Against Staphylococcus aureus and Candida albicans
    AU  - Ameji John Philip
    AU  - Haruna Idris Muhammad
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    AU  - Awor George Okorn
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    T2  - International Journal of Biochemistry, Biophysics & Molecular Biology
    JF  - International Journal of Biochemistry, Biophysics & Molecular Biology
    JO  - International Journal of Biochemistry, Biophysics & Molecular Biology
    SP  - 36
    EP  - 46
    PB  - Science Publishing Group
    SN  - 2575-5862
    UR  - https://doi.org/10.11648/j.ijbbmb.20170205.11
    AB  - The emergence of multi-drug resistant strain of Staphylococcus aureus and Candida albicans has necessitated the exploration and development of newer structural moiety of Nickel-Schiff bases’ complexes as potential drug candidates against the aforementioned pathogens owing to their enormous inhibitory activity against these microbes. In this study, a Quantitative Structure Activity Relationship analysis was performed on some selected complexes by correlating their experimentally validated bioactivities against the pathogenic microbes with the OD, 1D, 2D and 3D descriptors of the molecules through linear regression resulting in the generation of three statistically significant models from which a hexa-parametric model was selected as the most robust model with R2 = 0.909, R2 adj = 0.890, Q2 = 0.844, R2ext = 0.609. The optimization model hinted the predominance of the size descriptors (WD. volume and nT6Ring), descriptors of hydrogen bond acceptor ability of the complexes (nHBAcc2 and nHBAcc3) and a descriptor of molecular polarity (Weta 3. polar) in influencing the observed anti-microbial activites of the complexes. The wealth of information in this study could provide a blueprint in the design of novel bioactive complexes that could curb the alarming trend of multi-drug resistant strain of Staphylococcus aureus and Candida albicans.
    VL  - 2
    IS  - 5
    ER  - 

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Author Information
  • Department of Chemistry, Ahmadu Bello University Zaria, Zaria, Nigeria

  • Department of Chemistry, Audu Bako College of Agriculture Dambatta, Kano, Nigeria

  • Chemical Engineering Department, Ladoke Akintola University of Technology, Ogbomosho, Nigeria

  • Department of Chemistry, Ahmadu Bello University Zaria, Zaria, Nigeria

  • Department of Chemistry, Ahmadu Bello University Zaria, Zaria, Nigeria

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