Research Article | | Peer-Reviewed

TLR8 and TLR7/8 Activations Induce Tissue-specific Natural Killer Cell Gene Expressions in Rag1 Mutant Zebrafish Liver, Kidney, and Spleen

Received: 5 June 2025     Accepted: 18 June 2025     Published: 23 July 2025
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Abstract

TLR ligands Resiquimod (TLR7/8) and Motolimod (TLR8) are used to activate NK cells and enhance immune defenses. This study reports the differential gene expressions of innate immune markers and Natural Killer (NK) cell lysins in rag1 mutant (rag MT) zebrafish to TLR8 and TLR7/8 activation in liver, kidney, and spleen tissues. Rag MT zebrafish were intracoelomically injected with Motolimod (VTX), Resiquimod (R848), or control saline. Gene expressions of interferon gamma (ifnγ), T-box transcription factor 21 (t-bet), novel immune type receptor 9 (nitr9), and NK lysins a, b, c, and d (nkla, nklb, nklc, nkld) were quantified at 6-, 12-, and 24-hours post-injection using quantitative PCR. We observed that the effects of TLR7/8 and TLR8 stimulation vary depending on the tissue type. R848 significantly upregulated ifnγ, t-bet, nitr9, and NK lysins across various tissues. In contrast, VTX had a more limited effect and primarily influenced nklc and nkld in the kidney and spleen, and nkld in the liver, suggesting tissue-specific responsiveness to TLR8. No significant changes in ifnγ or nkla expression were noted with VTX in any tissues, highlighting the specificity of TLR7 over TLR8 in these responses. Tissue-specific responses revealed dominant activation by TLR7/8 in the liver, particularly influencing ifnγ, t-bet, nitr9, nklb, and nklc. The kidney had high responsiveness to both TLR7/8 and TLR8. The spleen demonstrated broad gene activation by TLR7/8, but only nklc and nkld were significantly upregulated by TLR8. These findings demonstrate that TLR8 has selective effects, while TLR7/8 more broadly activates genes across the liver, kidney, and spleen in rag MT zebrafish. These NK cell gene expression findings suggest exposure to TLR7/8 and TLR8 ligands elicited differential effects across liver, kidney, and spleen tissues of rag MT zebrafish.

Published in International Journal of Immunology (Volume 13, Issue 3)
DOI 10.11648/j.iji.20251303.11
Page(s) 42-51
Creative Commons

This is an Open Access article, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited.

Copyright

Copyright © The Author(s), 2025. Published by Science Publishing Group

Keywords

Toll Like Receptor Ligands, Natural Killer Cell Activation, Rag Mutant Zebrafish, Tissue-specific Responses

1. Introduction
Teleosts have well-developed innate and adaptive immune systems with cells morphologically similar to mammals and mediate classically defined immune responses . Due to their phylogenetic position as more ancient vertebrates, fish rely more on innate immune responses than mammals , making them especially valuable for studying conserved pathways of innate immunity . Zebrafish are well-suited for these investigations due to their tractable genetics, transparent embryos and availability of immune-deficient models. Zebrafish innate immune cells include monocytes, macrophages, basophils, eosinophils, mast cells, neutrophils, non-specific cytotoxic cells (NCCs) and Natural Killer (NK) cells . Rag1-/- mutant (rag MT) zebrafish lack mature T and B cells and are a good model for investigating fish innate immune cells and mechanisms without the confounding influence of adaptive responses . Natural Killer cells are one of the lymphocyte-like cells (LLCs) described in rag MT zebrafish .
Natural Killer (NK) cells recognize infected or stressed cells via pathogen recognition receptors (PRRs), including Toll-like receptors TLR7 and TLR8, which detect viral and bacterial RNAs within endosomes . Synthetic TLR agonists such as Resiquimod (R848) and Motolimod (VTX2337, or VTX) activate these receptors. R848 stimulates both TLR7 and TLR8, and VTX acts selectively on TLR8. R848 demonstrated efficacy in activating NK and dendritic cells and has been explored in human cancer immunotherapy, including skin-related cancers . Motolimod activates NK cells, dendritic cells, and monocytes and is used in general human oncology solid tumor therapy . The utility of TLR7 and TLR8 to dissect NK cell function has been well-documented in human immunological studies , supporting their application as tools to probe NK cell activation and heterogeneity in other vertebrate models, such as zebrafish.
Teleost NK cells are morphologically similar to mammalian NK cells and contain analogous cytotoxic granules . These granules house NK lysins, which are alpha-helical anti-microbial peptides (AMPs) that equip the host with immune responses against pathogen challenges; they were first identified as anti-bacterial peptides in porcine NK cells and cytotoxic T lymphocytes . When NK cells identify bacterially or virally infected cells, they release lysins into the immunological synapse with the target cell . NK lysins mediate antimicrobial activity by directly attacking pathogen-infected cells and activating dendritic cells, monocytes, and macrophages through chemotaxis and triggering the release of proinflammatory cytokines . NK lysins have been found in a variety of fish, such as Clownfish (Amphiprion ocellaris) , mud skipper (Boleophthalmus pectinirostris), Atlantic salmon (Salmo salar), common carp (Cyprinus carpio), large yellow croaker (Larimichthys crocea) , sole (Cynoglossus semilaevis), Japanese flounder (Paralichthys olivaceus), channel catfish (Ictalurus punctatus) , and zebrafish (Danio rerio) .
Significant upregulation of the genes analyzed in the current report has been correlated with NK cell-based immune responses in rag MT zebrafish . Four NK-lysin paralogs (nkla, nklb, nklc, and nkld) have been identified in zebrafish . T-bet, also known as Tbox-21, is a transcription factor in T and NK cells that is essential for NK cell maturation . Nitr9 is an activating receptor identified on NK cells in zebrafish Interferon gamma (ifnγ), produced by activated T cells and NK cells, is a cytokine whose levels correlate with cytotoxic activity .
Previously, we described cytotoxic cell subpopulations based on cell morphologies in the liver, kidney, and spleen tissues of rag MT zebrafish and reported tissue-specific gene expressions following TLR ligand exposures . In another study, principal component analysis of kidney and liver gene expressions further suggested that tissue-specific NK cell subpopulations correlated with survival following bacterial exposure after immune training with TLR ligands . The purpose of the current study was to further elucidate kidney, liver, and spleen-specific NK cell subpopulations by determining ifnγ, t-bet, nitr9, nkla, nklb, nklc, and nkld expressions following separate exposures to the TLR7/8 ligand R848 and the TLR8 ligand VTX in rag MT zebrafish.
2. Materials and Methods
2.1. Rag MT Zebrafish Care
The Mississippi State University Institutional Animal Care and Use Committee (MSU IACUC) approved the breeding protocols used to produce the fish in these experiments. Briefly, zebrafish were mated, raised, and maintained at 28°C in the specific pathogen-free hatchery, as previously described .
2.2. R848 and VTX Injections
Rag MT zebrafish were IC injected with VTX (0.25 nM or 2.5 nM/0.5 g of fish) and R848 (0.25 nM or 2.5 nM/0.5 g of fish) or endotoxin-free saline. TLR ligands were reconstituted in endotoxin-free saline, and a final volume of 10 µl was injected per fish.
2.3. RNA Extraction and cDNA Preparation
Fish were euthanized using a buffered 0.02% Tricaine Methanesulfonate solution (Finquel MS-222; Argent Chemical Laboratories, Redmond, WA). Liver, kidney, and spleen tissues were collected at 6-, 12-, and 24-hours post-injection (hpi) for each TLR ligand (n=5 per time point). Tissues were immediately transferred into 400 µl of Trizol reagent (Zymo Research, USA) and homogenized following standard procedures established in our laboratory . Total RNA was individually extracted from each homogenized liver, kidney, and spleen sample using the RNA extraction kit (Zymo Research, USA), according to the manufacturer's protocol. RNA quantity was assessed using a NanoDrop ND-1000 spectrophotometer, and samples were stored at -80°C until use. Complementary DNA (cDNA) was synthesized from 100 ng of RNA using the SuperScript III VILO™ cDNA Synthesis Kit (Invitrogen).
2.4. Quantifying Gene Expression
Ifnγ, t-bet, nitr9, nk lysin a, b, c, and d were measured using real-time quantitative PCR (Takara), as previously described . The t-bet, nk lysin a, b, c, and d primers and probes (Table 1) were designed by Primer3 plus (GraphPad) software, while primers and probes for ifnγ and nitr9 (Table 1) were adopted from previous publications. Primers and probes were obtained from Eurofins MWG Operon (Huntsville, Alabama, USA). Amplification of the acidic ribosomal phosphoprotein (arp) gene, which is ubiquitously expressed, served as the internal control . PCR reactions were conducted in a final volume of 25 µl, comprising 10 µl of target cDNA and 15 µl of master mix. The master mix included 8.8 µl of nuclease-free water (GIBCO, UltraPure™), 1.5 µl of 5 mM MgCl₂, 2.5 µl of 10× buffer, 0.5 µl of dNTPs, 0.2 µl of Taq Polymerase HS enzyme (Hot Start PCR Kit, TAKARA, Japan), 0.5 µl of forward primer (20 µM), 0.5 µl of reverse primer (20 µM), and 0.5 µl of probe (10 µM). Thermal cycling was performed under the following conditions: 50°C for 2 minutes, 95°C for 10 minutes, followed by 45 cycles of 95°C for 15 seconds and 61°C for 1 minute. Each sample (biological replicate) was analyzed in triplicate.
Table 1. Oligonucleotide primers and probes were used for qRT-PCR analysis of gene expression levels of arp, ifnγ, t-bet, nitr9, nkla, nklb, nklc, and nkld in rag mutant zebrafish liver, kidney, and spleen tissues. The housekeeping gene arp was used as a reference gene. Primers and probes for t-bet, nkla, nklb, nklc, and nkld were designed using Beacon Designer software (Bio-Rad) and Primer3Plus (GraphPad).

Gene

Oligonucleotide Sequences (5′-3′)

GenBank Accession No.

arp

Fwd: CTGCAAAGATGCCCAGGGA

Rev: TTGGAGCCGACATTGTCTGC

Probe: [6~FAM] TTCTGAAAATCATCCAACTGCTGGATGACTACC [BHQ1a~ Q]

NM_131580

ifnγ

Fwd: CTTTCCAGGCAAGAGTGCAGA

Rev: TCAGCTCAAACAAAGCCTTTCG

Probe: [6~FAM] AACGCTATGGGCGATCAAGGAAAACGAC[BHQ1a~ Q]

NM_212864

t-bet

Fwd: GATCAAGCTCTCTCTGTGATAG

Rev: GCTAAAGTCACACAGGTCT

Probe: [6~FAM] TTCTGAAGGTCACGGTCACA[BHQ1a~Q] *

NM_001170599.1

nitr9

Fwd: GTCAAAGGGACAAGGCTGATAGTT

Rev: GTTCAAAACAGTGCATGTAAGACTCA

Probe: [6~FAM] CAAGGTTTGGAAAAGCAC[BHQ1a~Q]

AY570237.1

nkla

Fwd: TTTCTGGTCGGCTTGCTCAT

Rev: TTCTCATTCACAGCCCGGTC

Probe: [6~FAM] TCTGCAGCTCACTGGGAGGTTCGTGA[BHQ1a~Q]

NM_001311794

nklb

Fwd: TCCGCAACATCTTTCTGGTCA

Rev: AGCCTGCTCATGAATGAAAATGA

Probe: [6~FAM] CACGCCTGCAAATCTGAACCACCCA[BHQ1a~Q]

NM_001311792

nklc

Fwd: CTGCTTGTGCTGCTCACTTG

Rev: AGCACACATGGAGATGAGAACA

Probe: [6~FAM] GGGCTTGCAAGTGGGCCATGGGAA[BHQ1a~Q]

NM_001311793.1

nkld

Fwd: ACCCTGCTCATCTCCTCTGT

Rev: CCCCAGCTAAAGCAAAACCC

Probe: [6~FAM] TGCCTGGGATGTGCTGGGCTTGCAA[BHQ1a~Q]

NM_212741.1

2.5. Data Analysis and Statistical Evaluation
Relative gene expressions were determined using the Pfaffl method, as previously described . Briefly, data obtained from qRT-PCR were expressed as fold changes relative to control conditions and were transformed to log2 values to normalize the distribution. A two-way Analysis of Variance (ANOVA) was performed to assess the independent variables and interactions. Dunnett’s multiple comparisons test was performed with TLR ligand type and concentration compared to PBS control. Statistics software used was GraphPad Prism version 7 for Mac, GraphPad Software, La Jolla, California, USA, www.graphpad.com. An alpha level of 0.05 was used to determine the significance of all analyses, and the results are included in Supplemental Tables S1, S2, S3, and S4.
3. Results
3.1. Liver
Following TLR7/8 stimulation (R848), ifnγ expression was significantly increased at 6 hpi at the high dose (2.5 mM) (p=0.0001), while no significant upregulation occurred with TLR8 (VTX) treatment at any dose or timepoint. T-bet expression was significantly elevated at 24 hpi only at the lower R848 dose (0.25 mM) (p=0.0030), with no response to TLR8. Expression of nitr9 increased significantly in the liver following high-dose R848 treatment at 6 hpi (p=0.0001) and 24 hpi (p=0.0453), and at 24 hpi (p=0.0453) following the low dose. No changes were observed with TLR8 at any rate. For nkla, expression remained unchanged in all groups. Nklb expression increased at 6 hpi with high-dose R848 (p=0.0001). Nklc was significantly upregulated at 12 hpi with high-dose R848 (p=0.0001) and 12 hpi with low-dose R848 (p=0.0001) but was not affected by TLR8. Nkld expression was not significantly affected by TLR7/8 stimulation but was upregulated by TLR8 (2.5 mM VTX) at 12 hpi (p=0.0002). These findings are summarized in Figure 1 and Table 2.
3.2. Kidney
In the kidney, ifnγ expression was significantly increased following TLR7/8 stimulation. High-dose R848 induced expression at 12 hpi (p=0.0414), while low-dose R848 induced expression at 12 hpi (p=0.0001). No significant increases were observed with TLR8. T-bet was significantly upregulated following TLR7/8 treatment at 24 hpi (p=0.0001 for low-dose R848) and with TLR8 at both 6 hpi (p=0.0009) and 12 hpi (p=0.0049) at low-dose VTX and 24 hpi at high-dose VTX (p=0.0270). Nitr9 expression significantly increased at 24 hpi following high-dose R848 (p=0.0001). Nitr9 was also significantly upregulated by the high dose TLR8 at 6 hpi (0.0046) and 24 hpi (p=0.0001), and low dose TLR8 at 6 hpi (p=0.0099) and 24 hpi (p=0.0064). Nkla was significantly upregulated by the low dose of R848 at 24 hpi (p=0.0001) and was not upregulated by TLR8. Nklb expression was significantly upregulated at 24 hpi following high-dose R848 (p=0.0295) and at 24 hpi with low-dose VTX (p=0.0295). Nklc expression significantly increased at multiple time points following both TLR7/8 and TLR8 stimulation. The high dose R848 increased expression at 6 hpi (p=0.0101) and 24 hpi (0.0017), and the low dose at 12 hpi (p=0.0031). Low-dose VTX significantly increased nklc expression at 6 hpi (p=0.0009) and 12 hpi (p=0.0031). Nkld expression was significantly upregulated following the low-dose TLR7/8 stimulation at 12 hpi (p=0.0001) and 24 hpi (p=0.0001), and by the high dose of TLR8 at 6 hpi (p=0.0001) and the low dose of VTX at 6 hpi (0.0002) and 12 hpi (p=0.0056).
3.3. Spleen
In the spleen, ifnγ expression was significantly upregulated by TLR7/8 exposure. High-dose R848 significantly increased expression at 6 hpi (p=0.0261) and 12 hpi (p=0.0006), while low-dose R848 significantly upregulated expression at 12 hpi (p=0.0001). T-bet expression was significantly upregulated at 12 hpi (p=0.0169) after low-dose R848 treatment. Nitr9 was significantly upregulated by TLR7/8. Low-dose R848 increased expression at 12 hpi (p=0.0003) and 24 hpi (p=0.0001). Nkla expression was significantly increased following high-dose R848 at 12 hpi (p=0.0103) and low-dose R848 at 24 hpi (p=0.0494). Nklb was significantly upregulated by high-dose R848 at 12 hpi (p=0.004) and 24 hpi (p=0.0107), and the low-dose R848 at 12 hpi (p=0.004) and 24 hpi (p=0.0107). Nklc expression was responsive to both TLR7/8 and TLR8. Low-dose R848 significantly increased expression at 12 hpi (p=0.0001), and TLR8 (high-dose VTX) significantly increased expression at 24 hpi (p=0.0001). Nkld was significantly upregulated by both TLR7/8 and TLR8 ligands. Low-dose R848 significantly increased expression at 24 hpi (0.0395) and high dose at 12 hpi (p=0.0001) and 24 hpi (p=0.0001), while TLR8 significantly increased expression at 24 hpi (p=0.0006).
4. Discussion
In earlier studies, we morphologically characterized lymphocyte-like cell populations in the liver, kidney, and spleen of rag MT zebrafish and identified tissue-specific gene expressions in response to the TLR ligands beta-glucan, Poly I:C, and R848 . Among these, R848 was further investigated for its ability to induce trained immunity and associated NK cell-specific gene responses . The current study builds on these findings to further characterize NK cell-specific gene responses across these tissues. We found tissue-specific differences in the expression of ifnγ, t-bet, nitr9, nkla, nklb, nklc, and nkld in response to TLR7/8 (R848) and TLR8 (VTX) ligands. VTX had no effect on ifnγ and nkla in the liver, kidney (hematopoietic tissue), and spleen, whereas R848 significantly upregulated ifnγ across all three tissues and nkla in the kidney and spleen. The effects of VTX were primarily limited to the kidney, where TLR8 activation significantly upregulated t-bet, nitr9, and nklb. In contrast, VTX did not significantly affect liver expression of nkla, nklb, or nklc. TLR7/8 activation by R848 generally induced broader upregulation across tissues, although nkla and nkld were not significantly upregulated in the liver. Dose and time-dependent responses were also apparent. Notably, lower concentrations of R848 and VTX often elicited stronger gene expression responses. This may reflect regulatory mechanisms that suppress excessive inflammation, a well-characterized feature of TLR signaling .
Although VTX had limited overall effects, it notably induced strong t-bet and nkld responses in the kidney, indicating a tissue-specific role for TLR8 in modulating kidney immunity. These results suggest that a subpopulation of NK or cytotoxic cells in the kidney responds specifically to TLR8 stimulation. The absence of significant changes in ifnγ, nkla, and nklb expression with VTX exposure supports the idea that TLR8 signaling does not broadly activate NK or cytotoxic cell responses. Interestingly, VTX selectively upregulated nkld in the liver and both nklc and nkld in the kidney and spleen, demonstrating tissue-specific regulation of NK-lysin genes by TLR8. In human leukocytes, VTX activates TLR8 and the NLRP3 inflammasome, leading to tumoricidal activity in THP-1 cells and monocytes . Since NLRP inflammasomes have also been described in zebrafish , it is plausible that VTX similarly activates these pathways in kidney hematopoietic cells.
Table 2. Significantly upregulated genes in liver, kidney, or spleen tissues of rag1 mutant zebrafish at different hours post injection (hpi) with 0.25 mM or 2.5 mM R848 or 0.25 mM or 2.5 mM VTX2337 (VTX) were summarized. Only genes with statistically significant upregulation are included in Table 2. Genes assessed include interferon gamma (ifnγ), T-box transcription factor 21 (t-bet), novel immune-type receptor 9 (nitr9), and Natural Killer (NK) cell lysins (nkla, nklb, nklc, and nkld). Fold changes were considered significant at p<0.05 (*) and highly significant p<0.001 (**), relative to control. The ANOVA data are provided in the supplementary materials.

Treatment

Tissues

Upregulated <10-fold change

Upregulated 10 to 100-fold change

Upregulated >100-fold change

0.25mM

2.5mM

0.25mM

2.5mM

0.25mM

2.5mM

R848

Liver

t-bet (24 hpi*)

nitr9 (24hpi*)

nklb (6hpi**)

nitr9 (24 hpi*)

Ifnγ (6hpi**),

nitr9 (6hpi**),

nklc (12hpi**)

Kidney

t-bet (24 hpi**)

ifnγ (12 hpi**),

t-bet (12 hpi**),

nkla (24 hpi**),

nklc (12 hpi**),

nkld (12 hpi**),

nkld (24 hpi**)

ifnγ (12 hpi*),

nklb (24 hpi*),

nklc (6 hpi*),

nklc (24 hpi*)

Spleen

nitr9 (12 hpi*),

nitr9 (24 hpi*)

t-bet (12 hpi*),

nkla (24 hpi*),

nklb (12 hpi*),

nklb (24 hpi*),

nkld (24 hpi**)

Ifnγ (6 hpi*),

Nkla (12 hpi*),

Nkld (24 hpi*)

ifnγ (12 hpi**),

nklc (12 hpi**),

nkld (12 hpi**)

ifnγ (12 hpi*),

nklc (24 hpi**),

0.25mM

2.5mM

0.25mM

2.5mM

0.25mM

2.5mM

VTX

Liver

Nkld (12 hpi*)

Kidney

nitr9 (6 hpi*),

nitr9 (24 hpi*),

nitr9 (6 hpi*)

Nklb (24 hpi*)

t-bet (6 hpi*),

t-bet (12 hpi*),

nklc (6 hpi*),

nklc (12 hpi*),

nkld (6 hpi*),

nkld (12 hpi*)

t-bet (24 hpi*),

nkld (6 hpi**)

Spleen

Nkld (24 hpi*)

Nklc (24 hpi**)

Overall, R848 induced a broader gene response than VTX, likely due to its strong and early induction of ifnγ in liver and spleen tissues, as ifnγ is known to enhance NK-lysin expression . In another study of rag MT zebrafish, R848 similarly upregulated ifnγ, t-bet, and nitr9 in the liver, kidney, and spleen , although splenic t-bet and nitr9 were not significantly induced. Our data highlight clear differences in gene expression across tissues, as well as variable responses to ligand concentration and type. These results suggest that liver, kidney, and spleen tissues harbor different proportions or subtypes of NK cells with distinct sensitivities to TLR7/8 (R848) and TLR8 (VTX). In human leukocytes, TLR7 and TLR8 activation trigger divergent pathways depending on cell type , and TLR8 selectively enhances the activity of the CD56 bright NK subset . Although zebrafish NK cell subset markers have not yet been defined, our results imply the existence of functionally distinct subpopulations.
In the liver, upregulation of ifnγ, t-bet, nitr9, nklb, and nklc was driven by TLR7/8 activation. TLR8 activation did not induce upregulations in these genes, suggesting TLR7-specific signaling plays a dominant role in this tissue. Ifnγ is associated with initial antiviral and antibacterial responses, but also plays a role in modulating inflammation. The principal producers of ifnγ are NK cells . Our findings suggest that in the liver, there is an ifnγ-producing NK cell subpopulation that is highly responsive to TLR7. T-bet, nitr9, nklb, and nklc are essential for NK cell and cytotoxic cell function and inflammatory responses in the liver. TLR7/8 activation did not affect liver nkla and nkld. This suggests that the cell types or immune functions initiated by these genes or signaling pathways are not responsive to TLR7/8 in the liver. Nklb and nklc were highly upregulated by TLR7/8 activation. TLR8 activation did not affect liver ifnγ, t-bet, nitr9, nkla, nklb, and nklc, but did significantly upregulate nkld, suggesting TLR8 is less expressed or signaling is mediated differently in the liver. In wild-type (WT) zebrafish liver, the relative basal expression of nkla, nklb, nklc, and nkld was 54%, 41%, 5%, and <1%, respectively . TLR7/8 activation induced significantly upregulated liver ifnγ, t-bet, and nitr9 in a similar study .
Ifnγ was highly upregulated in the kidney by TLR7/8, but not by TLR8 activation. T-bet was moderately upregulated by TLR7/8 activation and highly upregulated by TLR8 activation in kidney innate immune cells, in the absence of T cells. This is interesting because t-bet is traditionally recognized as a T-cell transcription factor . This upregulation suggests that in rag MT zebrafish, t-bet plays a role in NK cells, suggesting NK/T cells and lymphocyte-like innate cells activation and population expansion. Our findings also suggest that in zebrafish, t-bet may be involved in the transcription of multiple innate immune cell types in the kidney environment. Nkla and nkld were highly upregulated by TLR7/8 activation in the kidney, suggesting that signaling components activated by TLR7/8 are particularly effective at inducing these genes in the kidney environment. Pereiro indicated that in the rag MT zebrafish kidney, CTLs were specialized in producing nkla and nkld. In our study, TLR8 activation resulted in highly differentially expressed nkld but not nkla in the kidney, suggesting that an NK or cytotoxic cell subset expressing TLR8 produces nkld in the kidney. Single-cell transcriptional analysis of rag2E450fs mutant zebrafish kidney marrow determined that nkl.4+ (nkld+) cells were cytotoxic T/NK cells, and this population significantly expanded after viral infection ; this study did not examine nkla, nklb, or nklc. In our study, nklb and nklc were highly upregulated by TL7/8 activation, suggesting that these pathways are effective at activating these genes to enhance cytotoxic functions in the kidney interstitial tissue. TLR8 activation induced nklc upregulation but not nklb. TLR7/8 activation induced significantly upregulated kidney ifnγ, t-bet, and nitr9 in a similar study .
In the spleen, ifnγ was upregulated by TLR7/8, but not by TLR8, suggesting TLR7 plays a critical role in ifnγ induction in the spleen. Spleen cells can differentially express TLR7 and TLR8, or the cells may have different sensitivities to TLR7 and TLR8. This finding also suggests that TLR7 is more involved in pathways leading to ifnγ production than TLR8, or that TLR7 and TLR8 pathways might have negative regulatory effects on each other in the spleen tissue environment. This mechanism could control inflammation. Nkla and nklb were moderately upregulated by TLR7/8 but not TLR8. This suggests that TLR7 plays a key role in initiating the expression of nkla and nklb and that TLR8 does not effectively activate the nkla and nklb signaling pathways or is possibly suppressed by TLR7 activation. TLR7/8 and TLR8 are highly upregulated nklc and moderately upregulated nkld, suggesting that the activation of TLR7 and TLR8 either alone or synergistically induces pathways for nklc and nkld production. A broader activation potential may indicate that nklc and nkld may have more critical roles in splenic NK cell functions. Overall, TLR7-mediated pathways appear to play the dominant role in activating NK-lysin genes and modulating NK cell functions in the spleen. TLR7/8 activation induced significantly upregulated splenic ifnγ in a similar study .
Figure 1. Significantly upregulated NK cell-related genes in the liver, kidney, and spleen of rag1 mutant zebrafish following injection with 0.25 mM or 2.5 mM R848 or VTX2337 (VTX) were summarized and presented in a dot matrix plot. Each dot represents a gene that was significantly upregulated at the indicated time point post-injection (hpi). The size of the dot indicates the fold change category: <10-fold, 10 to 100-fold, or >100 fold. Genes assessed include interferon gamma (ifnγ), T-box transcription factor 21 (t-bet), novel immune-type receptor 9 (nitr9), and Natural Killer (NK) cell lysins (nkla, nklb, nklc, and nkld).
To better understand the divergent gene expression profiles observed among tissues, it is important to consider the immune microenvironments of the zebrafish liver, kidney, and spleen tissues. In zebrafish, the kidney is the primary hematopoietic tissue and contains a diverse population of pluripotent, developing, and mature immune cells, including innate lymphoid cells, monocytes, and granulocytes. This diversity may allow the kidney to respond more selectively to TLR stimulation, particularly TLR8, which broadly affected gene expression in this tissue. In contrast, the liver is both an immune and metabolic organ, with resident macrophages and cytotoxic cells that may be adapted to tolerate frequent exposure to antigens. This may influence the sensitivity of NK cell activation by TLR7 and 8. The spleen is a secondary lymphoid organ, with lymphocyte-like cells and antigen-presenting cells, resulting in selective gene expression responses. Together, these factors may contribute to the gene expression patterns observed following TLR7/8 or TLR8 stimulation.
5. Conclusions
Our findings demonstrate differential gene expression in response to TLR7 and TLR8 activation. Together with previous research , these findings can infer NK cell and NK/cytotoxic cell subpopulations in liver, kidney, and spleen tissues of rag MT zebrafish, and these cells respond differently based on different tissue environments. TLR7/8 activation resulted in significantly upregulated nklb, nklc, and nkld in the liver, nklb, nklc, and nkld in the kidney, and nkla, nklb, nklc, and nkld in the spleen. TLR8 activation resulted in significantly upregulated nklc and nkld in the kidney, spleen, and nkld in the liver. The only cells that significantly upregulated nkla or nklb were activated by TLR7/8; these cells were not activated by TLR8 alone. NK cell and cytotoxic responses vary by tissue due to the functional differences of cell populations in different tissues in response to a wide spectrum of pathogens and insults.
Abbreviations

NK

Natural Killer

Rag MT

Rag1 Mutant (rag MT) Zebrafish

ifnγ

Interferon Gamma

t-bet

T-box Transcription Factor 21

Nitr9

Novel Immune Type Receptor-9

Nkla

NK Lysin a

Nklb

NK Lysin b

Nklc

NK Lysin c

Nkld

NK Lysin d

NCC

Non-specific Cytotoxic Cell

LLC

Lymphocyte-like Cell

PRR

Pathogen Recognition Receptor

PAMP

Pathogen Associated Molecular Pattern

R848

Resiquimod

VTX

Motolimod VTX2337

AMP

Anti-microbial peptides

MSU IACUC

Mississippi State University Institutional Animal Care and Use Committee

cDNA

complementary DNA

PCR

polymerase chain reaction

Arp

acidic ribosomal phosphoprotein

ANOVA

Analysis of Variance

Acknowledgments
We thank Dr. Beth Peterman for technical help.
Author Contributions
Preeti Judith Muire: Conceptualization, Data curation, Formal Analysis, Investigation, Methodology, Writing - original draft, Writing - review & editing
Lora Petrie-Hanson: Conceptualization Formal Analysis, Funding acquisition, Methodology, Project administration, Resources, Supervision, Validation, Writing - review & editing
Institutional Review Board Statement
This study was approved by the Institutional Animal Care and Use Committee of Mississippi State University protocol #17-028.
Data Availability Statement
Data available on request from the authors. The raw data supporting the conclusion of this article will be made available by the authors on request.
Funding
This research was funded by the Mississippi State University College of Veterinary Medicine Office of Research and Graduate Studies.
Conflicts of Interest
The authors declare no conflict of interest.
Supplementary Material

Below is the link to the supplementary material:

Supplementary Material 1.docx

References
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    Muire, P. J., Petrie-Hanson, L. (2025). TLR8 and TLR7/8 Activations Induce Tissue-specific Natural Killer Cell Gene Expressions in Rag1 Mutant Zebrafish Liver, Kidney, and Spleen. International Journal of Immunology, 13(3), 42-51. https://doi.org/10.11648/j.iji.20251303.11

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    ACS Style

    Muire, P. J.; Petrie-Hanson, L. TLR8 and TLR7/8 Activations Induce Tissue-specific Natural Killer Cell Gene Expressions in Rag1 Mutant Zebrafish Liver, Kidney, and Spleen. Int. J. Immunol. 2025, 13(3), 42-51. doi: 10.11648/j.iji.20251303.11

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    AMA Style

    Muire PJ, Petrie-Hanson L. TLR8 and TLR7/8 Activations Induce Tissue-specific Natural Killer Cell Gene Expressions in Rag1 Mutant Zebrafish Liver, Kidney, and Spleen. Int J Immunol. 2025;13(3):42-51. doi: 10.11648/j.iji.20251303.11

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  • @article{10.11648/j.iji.20251303.11,
      author = {Preeti Judith Muire and Lora Petrie-Hanson},
      title = {TLR8 and TLR7/8 Activations Induce Tissue-specific Natural Killer Cell Gene Expressions in Rag1 Mutant Zebrafish Liver, Kidney, and Spleen
    },
      journal = {International Journal of Immunology},
      volume = {13},
      number = {3},
      pages = {42-51},
      doi = {10.11648/j.iji.20251303.11},
      url = {https://doi.org/10.11648/j.iji.20251303.11},
      eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.iji.20251303.11},
      abstract = {TLR ligands Resiquimod (TLR7/8) and Motolimod (TLR8) are used to activate NK cells and enhance immune defenses. This study reports the differential gene expressions of innate immune markers and Natural Killer (NK) cell lysins in rag1 mutant (rag MT) zebrafish to TLR8 and TLR7/8 activation in liver, kidney, and spleen tissues. Rag MT zebrafish were intracoelomically injected with Motolimod (VTX), Resiquimod (R848), or control saline. Gene expressions of interferon gamma (ifnγ), T-box transcription factor 21 (t-bet), novel immune type receptor 9 (nitr9), and NK lysins a, b, c, and d (nkla, nklb, nklc, nkld) were quantified at 6-, 12-, and 24-hours post-injection using quantitative PCR. We observed that the effects of TLR7/8 and TLR8 stimulation vary depending on the tissue type. R848 significantly upregulated ifnγ, t-bet, nitr9, and NK lysins across various tissues. In contrast, VTX had a more limited effect and primarily influenced nklc and nkld in the kidney and spleen, and nkld in the liver, suggesting tissue-specific responsiveness to TLR8. No significant changes in ifnγ or nkla expression were noted with VTX in any tissues, highlighting the specificity of TLR7 over TLR8 in these responses. Tissue-specific responses revealed dominant activation by TLR7/8 in the liver, particularly influencing ifnγ, t-bet, nitr9, nklb, and nklc. The kidney had high responsiveness to both TLR7/8 and TLR8. The spleen demonstrated broad gene activation by TLR7/8, but only nklc and nkld were significantly upregulated by TLR8. These findings demonstrate that TLR8 has selective effects, while TLR7/8 more broadly activates genes across the liver, kidney, and spleen in rag MT zebrafish. These NK cell gene expression findings suggest exposure to TLR7/8 and TLR8 ligands elicited differential effects across liver, kidney, and spleen tissues of rag MT zebrafish.},
     year = {2025}
    }
    

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  • TY  - JOUR
    T1  - TLR8 and TLR7/8 Activations Induce Tissue-specific Natural Killer Cell Gene Expressions in Rag1 Mutant Zebrafish Liver, Kidney, and Spleen
    
    AU  - Preeti Judith Muire
    AU  - Lora Petrie-Hanson
    Y1  - 2025/07/23
    PY  - 2025
    N1  - https://doi.org/10.11648/j.iji.20251303.11
    DO  - 10.11648/j.iji.20251303.11
    T2  - International Journal of Immunology
    JF  - International Journal of Immunology
    JO  - International Journal of Immunology
    SP  - 42
    EP  - 51
    PB  - Science Publishing Group
    SN  - 2329-1753
    UR  - https://doi.org/10.11648/j.iji.20251303.11
    AB  - TLR ligands Resiquimod (TLR7/8) and Motolimod (TLR8) are used to activate NK cells and enhance immune defenses. This study reports the differential gene expressions of innate immune markers and Natural Killer (NK) cell lysins in rag1 mutant (rag MT) zebrafish to TLR8 and TLR7/8 activation in liver, kidney, and spleen tissues. Rag MT zebrafish were intracoelomically injected with Motolimod (VTX), Resiquimod (R848), or control saline. Gene expressions of interferon gamma (ifnγ), T-box transcription factor 21 (t-bet), novel immune type receptor 9 (nitr9), and NK lysins a, b, c, and d (nkla, nklb, nklc, nkld) were quantified at 6-, 12-, and 24-hours post-injection using quantitative PCR. We observed that the effects of TLR7/8 and TLR8 stimulation vary depending on the tissue type. R848 significantly upregulated ifnγ, t-bet, nitr9, and NK lysins across various tissues. In contrast, VTX had a more limited effect and primarily influenced nklc and nkld in the kidney and spleen, and nkld in the liver, suggesting tissue-specific responsiveness to TLR8. No significant changes in ifnγ or nkla expression were noted with VTX in any tissues, highlighting the specificity of TLR7 over TLR8 in these responses. Tissue-specific responses revealed dominant activation by TLR7/8 in the liver, particularly influencing ifnγ, t-bet, nitr9, nklb, and nklc. The kidney had high responsiveness to both TLR7/8 and TLR8. The spleen demonstrated broad gene activation by TLR7/8, but only nklc and nkld were significantly upregulated by TLR8. These findings demonstrate that TLR8 has selective effects, while TLR7/8 more broadly activates genes across the liver, kidney, and spleen in rag MT zebrafish. These NK cell gene expression findings suggest exposure to TLR7/8 and TLR8 ligands elicited differential effects across liver, kidney, and spleen tissues of rag MT zebrafish.
    VL  - 13
    IS  - 3
    ER  - 

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